DNA Binding Motif

						

			
Accessions: FOXD2_methyl_2 (HT-SELEX2 May2017)

			
Names: FOXD2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: ywACAATAACRwta
Weblogo: 
PSSM: P0      A      C      G      T
01     89    171     31    136      y
02    278     52      2    150      w
03    427      0     81      0      A
04      0    427     85      0      C
05    427     44     10      0      A
06    427     98     27      0      A
07      0     68      0    427      T
08    427      7      0      9      A
09    427     10      7     11      A
10      1    335      1     92      C
11    427      5    171      0      R
12    166     57      0    261      w
13     95      0     66    332      t
14    164     89     90     84      a
Binding TFs: FOXD2 (Fork head domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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