DNA Binding Motif

						

			
Accessions: M0382 (AthalianaCistrome v4_May2016)

			
Names: AT1G49560.ampDAP, T00982;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: rGaATCmaAGATTCy
Weblogo: 
PSSM: P0      A      C      G      T
01    231     91    168    110      r
02     99     52    421     28      G
03    273     59    124    144      a
04    474     21     28     77      A
05     46     81     13    460      T
06     62    428     25     85      C
07    219    150    102    129      m
08    320     65    114    101      a
09    486      3     34     77      A
10      1      0    570     29      G
11    599      0      0      1      A
12      6      0      0    594      T
13     41     43      6    510      T
14      1    599      0      0      C
15    106    194     61    239      y
Binding TFs: T00982 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.