DNA Binding Motif

						

			
Accessions: NKX2-5_methyl_1 (HT-SELEX2 May2017)

			
Names: NKX2-5
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: mCCACTTrAs
Weblogo: 
PSSM: P0      A      C      G      T
01   2974   2377   1433   1365      m
02    932   8149   1790    166      C
03      0   8149      3     74      C
04   8149      0      0    111      A
05      0   8149      0      0      C
06      0      0      0   8149      T
07      0    176      0   8149      T
08   2917   1226   5232     92      r
09   8149    543    655   1504      A
10   2026   3146   2559    418      s
Binding TFs: NKX2-5 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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