DNA Binding Motif
| Accessions: | MA0148.4 (JASPAR 2024) |
| Names: | FOXA1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | awGTAAACATdw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 134110 53261 64510 70922 a 02 115096 16071 53682 137954 w 03 23286 5935 281612 11970 G 04 11061 13932 6092 291718 T 05 297679 14648 5243 5233 A 06 294900 13410 3774 10719 A 07 312906 2452 3652 3793 A 08 7396 272943 4805 37659 C 09 308904 3674 3226 6999 A 10 42299 23038 27283 230183 T 11 82540 60571 94376 85316 d 12 88104 64037 70936 99726 w |
| Type: | Heterodimer |
| Binding TFs: | P55317 (Fork head domain, Forkhead N-terminal region, HNF3 C-terminal domain) P55317 |
| Binding Sites: | MA0148.4.16 MA0148.4.1 MA0148.4.10 MA0148.4.11 / MA0148.4.6 MA0148.4.12 MA0148.4.13 MA0148.4.14 MA0148.4.15 / MA0148.4.7 MA0148.4.16 MA0148.4.17 MA0148.4.18 MA0148.4.19 / MA0148.4.9 MA0148.4.1 / MA0148.4.2 MA0148.4.10 / MA0148.4.20 MA0148.4.2 / MA0148.4.3 MA0148.4.4 MA0148.4.5 MA0148.4.6 MA0148.4.3 / MA0148.4.7 MA0148.4.4 / MA0148.4.8 MA0148.4.5 / MA0148.4.9 MA0148.4.11 MA0148.4.12 MA0148.4.13 MA0148.4.14 MA0148.4.15 MA0148.4.17 MA0148.4.18 MA0148.4.19 MA0148.4.20 MA0148.4.8 |
| Publications: | Zhang Y, Liu T, Meyer C.A, Eeckhoute J, Johnson D.S, Bernstein B.E, Nusbaum C, Myers R.M, Brown M, Li W, Liu X.S. Model-based analysis of ChIP-Seq (MACS). Genome biology 9:R137 (2008). [Pubmed] |
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