DNA Binding Motif

Accessions: 1lfu_P (3D-footprint 20231221)
Names: homeobox protein PBX1
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NMR Solution Structure of the Extended PBX Homeodomain Bound to DNA
Length: 6
Consensus: aaTnAT
01 54 13 13 16 a
02 54 13 16 13 a
03 0 0 0 96 T
04 24 24 24 24 n
05 96 0 0 0 A
06 0 0 0 96 T
Binding TFs: 1lfu_P (Homeobox domain, Homeobox KN domain, Homeodomain leucine-zipper encoding, Homez)
Binding Sites: 1lfu_A
Publications: Sprules T, Green N, Featherstone M, Gehring K. Lock and key binding of the HOX YPWM peptide to the PBX homeodomain. The Journal of biological chemistry 278:1053-8 (2003). [Pubmed]

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