DNA Binding Motif

						

			
Accessions: HOXA13_methyl_6 (HT-SELEX2 May2017)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: rcCAATAAAmy
Weblogo: 
PSSM: P0      A      C      G      T
01     78     56     65     46      r
02     71    245     68      5      c
03      0    245      0     79      C
04    245     29      0     61      A
05    245     21      0      0      A
06      0      0      0    245      T
07    245      0      0     48      A
08    245      0      0      0      A
09    245      5      0      0      A
10    245    101     31     14      m
11     43    100     26     76      y
Binding TFs: HOXA13 (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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