DNA Binding Motif

Accessions: UN0379.2 (JASPAR 2024)
Names: S1FA3
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 8
Consensus: TTCyAGAA
Weblogo:
PSSM: P0 A C G T
01 97 81 34 1768 T
02 39 9 5 1927 T
03 17 1915 23 25 C
04 58 1078 118 726 y
05 1842 16 102 20 A
06 38 30 1892 20 G
07 1943 4 15 18 A
08 1800 19 69 92 A
Type: Heterodimer
Binding TFs: Q93VI0 (DNA binding protein S1FA)
Q93VI0
Binding Sites: UN0379.2.15 / UN0379.2.16 / UN0379.2.4 / UN0379.2.5 / UN0379.2.6 / UN0379.2.7
UN0379.2.11 / UN0379.2.12 / UN0379.2.2 / UN0379.2.8 / UN0379.2.9
UN0379.2.19
UN0379.2.20
UN0379.2.3
UN0379.2.10 / UN0379.2.13
UN0379.2.17
UN0379.2.14
UN0379.2.1
UN0379.2.18

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