DNA Binding Motif
| Accessions: | 1f5t_A (3D-footprint 20231221) |
| Names: | DIPHTHERIA TOXIN REPRESSOR |
| Organisms: | Corynebacterium diphtheriae, strain ATCC 700971 / NCTC 13129 / Biotype gravis |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | DIPHTHERIA TOX REPRESSOR (C102D MUTANT) COMPLEXED WITH NICKEL AND DTXR CONSENSUS BINDING SEQUENCE |
| Length: | 4 |
| Consensus: | GGCT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 9 9 69 9 G 02 0 0 96 0 G 03 9 69 9 9 C 04 9 9 9 69 T |
| Binding TFs: | 1f5t_A (Iron dependent repressor, N-terminal DNA binding domain, Iron dependent repressor, metal binding and dimerisation domain) |
| Binding Sites: | 1f5t_E 1f5t_F |
| Publications: | Chen C.S, White A, Love J, Murphy J.R, Ringe D. Methyl groups of thymine bases are important for nucleic acid recognition by DtxR. Biochemistry 39:10397-407 (2000). [Pubmed] |
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