DNA Binding Motif

						

			
Accessions: NR5A2_6 (HT-SELEX2 May2017)

			
Names: NR5A2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 18
Consensus: tCAAGGTCrYGACCTTGr
Weblogo: 
PSSM: P0      A      C      G      T
01     64    201    100    703      t
02     56    925    255     22      C
03   1059     21     45     13      A
04   1051     20     15     27      A
05     29     51   1050     32      G
06     24      8   1064      5      G
07    108    253     47    912      T
08     18   1031     11     67      C
09    654      0    414      0      r
10     24    300     12    732      Y
11     57     29   1043     32      G
12    924     71    252    106      A
13      6   1061     20     35      C
14     32   1050     52     27      C
15     37     43     34   1051      T
16     28     75     47   1050      T
17     31    260    894     91      G
18    645     61    282     79      r
Binding TFs: NR5A2 (Zinc finger, C4 type (two domains))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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