DNA Binding Motif
| Accessions: | MA0877.3 (JASPAR 2024) |
| Names: | BARHL1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | CAP-SELEX |
| Length: | 8 |
| Consensus: | acCGTTTA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3960 493 1070 947 a 02 1989 3960 918 1760 c 03 202 3960 3 26 C 04 833 34 3960 46 G 05 281 223 33 3960 T 06 0 4 0 3960 T 07 96 9 0 3960 T 08 3960 16 26 125 A |
| Type: | Heterodimer |
| Binding TFs: | Q9BZE3 (Homeobox domain) Q9BZE3 |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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