DNA Binding Motif

						

			
Accessions: M0263 (AthalianaCistrome v4_May2016)

			
Names: At1g64620.DAP, T02936;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 19
Consensus: wwaaaamAAAAAGkwaaww
Weblogo: 
PSSM: P0      A      C      G      T
01    303     50     80    167      w
02    255     64    109    172      w
03    282     88    109    121      a
04    299     67    105    129      a
05    288     80    113    119      a
06    213    111    137    139      a
07    177    169    128    126      m
08    507     27     47     19      A
09    513      0      0     87      A
10    600      0      0      0      A
11    600      0      0      0      A
12    600      0      0      0      A
13      0      0    600      0      G
14     53     61    168    318      k
15    233     28    106    233      w
16    406     13    125     56      a
17    375     59     50    116      a
18    324     58     63    155      w
19    298     51     78    173      w
Binding TFs: T02936 (Dof domain, zinc finger)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.