DNA Binding Motif

						

			
Accessions: MA0103.3 (JASPAR 2024)

			
Names: ZEB1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: ssCACCTGsss
Weblogo: 
PSSM: P0      A      C      G      T
01   3211   7998   5228   3692      s
02   4685   5550   5179   4715      s
03    114  19195    158    662      C
04  19905      0    223      1      A
05     32  19878     97    122      C
06    193  19257    649     30      C
07      4    501    355  19269      T
08    441    178  19381    129      G
09   1982   9561   5178   3408      s
10   4258   6117   6601   3153      s
11   3490   6955   5828   3856      s
Type: Heterodimer
Binding TFs: P37275 (Homeobox domain, Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
P37275
Binding Sites: MA0103.3.1 / MA0103.3.12
MA0103.3.10
MA0103.3.11
MA0103.3.13
MA0103.3.14
MA0103.3.15
MA0103.3.16
MA0103.3.17
MA0103.3.18
MA0103.3.19
MA0103.3.2
MA0103.3.20
MA0103.3.3
MA0103.3.4
MA0103.3.5
MA0103.3.6
MA0103.3.7
MA0103.3.8
MA0103.3.9
			
Publications: Sekido R., Murai K., Funahashi J.-i., Kamachi Y., Fujisawa-Sehara A., Nabeshima Y.-I., Kondoh H. The delta-crystallin enhancer-binding protein deltaEF1 is a repressor of E2-box-mediated gene activation. Mol. Cell. Biol. 14:5692-5700 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.