DNA Binding Motif

						

			
Accessions: PAX3_methyl_3 (HT-SELEX2 May2017)

			
Names: PAX3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: mTAATYGATTak
Weblogo: 
PSSM: P0      A      C      G      T
01   2393   2750   1543   2027      m
02   1557    501    980   8713      T
03   8713     88    150     64      A
04   8713      5     28     15      A
05     48    136     37   8713      T
06     22   2262    104   6452      Y
07    325    239   8713     18      G
08   8713    102    287     27      A
09     31     33     62   8713      T
10    115    195    135   8713      T
11   8713   1696   1304   2507      a
12   1661   1335   2816   2902      k
Binding TFs: PAX3 (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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