DNA Binding Motif

						

			
Accessions: GATA1 (Athamap 20091028)

			
Names: GATA1
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 10
Consensus: gkckwwycAT
Weblogo: 
PSSM: P0      A      C      G      T
01      2      1      6      0      g
02      0      2      3      4      k
03      2      4      2      1      c
04      0      0      5      4      k
05      6      0      0      3      w
06      3      0      0      6      w
07      0      4      0      5      y
08      0      6      1      2      c
09      8      0      1      0      A
10      1      0      0      8      T
Binding TFs: GATA1 (GATA zinc finger)
Binding Sites: GATA1_1
GATA1_2
GATA1_3
GATA1_4
GATA1_5
GATA1_6
GATA1_7
GATA1_8
GATA1_9
			
Publications: Teakle GR, Manfield IW, Graham JF, Gilmartin PM. 2002. Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics. Plant Mol Biol. 50:43-57. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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