DNA Binding Motif

						

			
Accessions: 5yj3_D (3D-footprint 20231221)

			
Names: Telomere zinc finger-associated protein
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of TZAP and telomeric DNA complex
Length: 7
Consensus: rCCCTAr
Weblogo: 
PSSM: P0      A      C      G      T
01     48     12     24     12      r
02      0     96      0      0      C
03      0     96      0      0      C
04      0     96      0      0      C
05      0      0      0     96      T
06     96      0      0      0      A
07     48     12     24     12      r
Binding TFs: 5yj3_D (Zinc finger, C2H2 type, C2H2 type zinc-finger (2 copies), Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 5yj3_A
5yj3_B
			
Publications: Zhao Y, Zhang G, He C, Mei Y, Shi Y, Li F. The 11th C2H2 zinc finger and an adjacent C-terminal arm are responsible for TZAP recognition of telomeric DNA. Cell Res 28:130-134 (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.