DNA Binding Motif

						

			
Accessions: M0669 (AthalianaCistrome v4_May2016)

			
Names: ANAC042.DAP, T10016;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 20
Consensus: ygCCGTrwhhtyymCGyyry
Weblogo: 
PSSM: P0      A      C      G      T
01     11    290      1    298      y
02     87      5    392    116      g
03     66    417     94     23      C
04      0    600      0      0      C
05      0      3    593      4      G
06      0      1    101    498      T
07    181    126    186    107      r
08    181    105    144    170      w
09    171    160     76    193      h
10    178    164    108    150      h
11    136    113    131    220      t
12    122    214     65    199      y
13    143    164    118    175      y
14    314    271      5     10      m
15     28    529     34      9      C
16     14      0    563     23      G
17     48    214    140    198      y
18    131    231      6    232      y
19    354      8    192     46      r
20     68    253     32    247      y
Binding TFs: T10016 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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