DNA Binding Motif

						

			
Accessions: 6nce_A (3D-footprint 20231221)

			
Names: Forkhead box protein N3
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the human FOXN3 DNA binding domain in complex with a forkhead DNA sequence
Length: 6
Consensus: TaAaCA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02     60     12     12     12      a
03     96      0      0      0      A
04     60     12     12     12      a
05      0     96      0      0      C
06     84      0     12      0      A
Binding TFs: 6nce_A (Fork head domain)
Binding Sites: 6nce_C
6nce_D
			
Publications: Rogers JM, Waters CT, Seegar TCM, Jarrett SM, Hallworth AN, Blacklow SC, Bulyk ML. Bispecific Forkhead Transcription Factor FoxN3 Recognizes Two Distinct Motifs with Different DNA Shapes. Mol Cell 74:245-253 (2019). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.