DNA Binding Motif

						

			
Accessions: M0475 (AthalianaCistrome v4_May2016)

			
Names: LBD13.DAP, T09309;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 17
Consensus: cGsCGgarwwkrCGGcG
Weblogo: 
PSSM: P0      A      C      G      T
01     66    382     27    108      c
02     79     25    417     62      G
03     11    244    328      0      s
04     31    548      0      4      C
05     24      0    559      0      G
06    118     58    320     87      g
07    314     83     98     88      a
08    258     10    185    130      r
09    265     27    127    164      w
10    196     94     23    270      w
11    117     75    155    236      k
12    166     87    289     41      r
13     29    524      0     30      C
14      3      0    577      3      G
15      2     41    534      6      G
16    142    306     20    115      c
17     92     20    436     35      G
Binding TFs: T09309 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.