DNA Binding Motif

						

			
Accessions: Nac (RegulonDB 7.5)

			
Names: Nac, Nac DNA-binding transcriptional dual regulator
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 15
Consensus: wwwYdmTwwTdysry
Weblogo: 
PSSM: P0      A      C      G      T
01      7      1      1      3      w
02      6      0      0      6      w
03      5      0      1      6      w
04      0      3      0      9      Y
05      3      0      4      5      d
06      6      4      0      2      m
07      0      0      2     10      T
08      4      0      1      7      w
09      8      0      0      4      w
10      0      0      0     12      T
11      4      0      5      3      d
12      0      4      2      6      y
13      0      3      7      2      s
14      6      2      4      0      r
15      2      4      0      6      y
Binding TFs: ECK120008111 (Bacterial regulatory helix-turn-helix protein, lysR family, LysR substrate binding domain)
Binding Sites: ECK120011267
ECK120011274
ECK120011276
ECK120011278
ECK120011280
ECK120011282
ECK120011284
ECK120011286
ECK120011432
ECK120011745
ECK120029430
ECK120029432
			
	
			


			

				

				
				
				
				

			

			

		

	
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