DNA Binding Motif

						

			
Accessions: FOXA2_HUMAN.H10MO.A|M01143 (HOCOMOCO 10)

			
Names: FOXA2
Organisms: Homo sapiens
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Forkhead box (FOX) factors{3.3.1}; FOXA{3.3.1.1}
Length: 11
Consensus: TGTTTRCwywg
Weblogo: 
PSSM: P0      A      C      G      T
01      5      2      0    487      T
02     83      1    409      1      G
03      7      1      1    485      T
04      2      1     38    453      T
05      0      2     58    434      T
06    362      2    130      0      R
07      4    414      4     72      C
08    184     61      0    249      w
09     28    204     44    218      y
10    259      7     14    214      w
11     90     60    269     75      g
Binding TFs: FOXA2_HUMAN (Fork head domain, Forkhead N-terminal region, HNF3 C-terminal domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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