DNA Binding Motif

						

			
Accessions: FOXP1_methyl_1 (HT-SELEX2 May2017)

			
Names: FOXP1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 30
Consensus: tTGTTTryyrTsvmrysysAyrsAmAACAw
Weblogo: 
PSSM: P0      A      C      G      T
01    517    436    399    850      t
02     19    240     10   2201      T
03    598      0   2201      2      G
04     15     24      1   2201      T
05     44     36    264   2201      T
06      9     21    456   2201      T
07   1504     13    698    304      r
08      4   1172    260    765      y
09    259    973    320    649      y
10   1200     60    791    151      r
11    216    265     38   1682      T
12    345    719    629    509      s
13    642    555    709    295      v
14    594    595    502    510      m
15    668    486    553    494      r
16    497    661    437    606      y
17    512    617    608    464      s
18    267    820    449    666      y
19    508    763    631    299      s
20   1903     14    131    153      A
21     90    960     17   1134      y
22    712    270    953    265      r
23    527    827    780     68      s
24   1674    112     49    528      A
25   1022   2201      2     50      m
26   2201     10      5     28      A
27   2201     14     18      0      A
28     10   2201      0    458      C
29   2201     20    200     41      A
30    855    499    251    597      w
Binding TFs: FOXP1 (Fork head domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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