DNA Binding Motif

						

			
Accessions: HOXA10_DBD_1 (HumanTF 1.0)

			
Names: HOXA10
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 12
Consensus: rrTCrTWAAaww
Weblogo: 
PSSM: P0      A      C      G      T
01   1328    795   1498    866      r
02   2284   1130   4488     43      r
03    176    342     36   4488      T
04    416   4488      4    162      C
05   3083      7   4488     42      r
06     39      0      0   4488      T
07   3214     23     20   1273      W
08   4488      0      0     96      A
09   4488    120     25    244      A
10   4488   1212    756   1659      a
11   1380   1043    720   1346      w
12   1207    916    953   1412      w
Binding TFs: HOXA10_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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