DNA Binding Motif

						

			
Accessions: UN0249.2 (JASPAR 2024)

			
Names: ZSCAN9
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 18
Consensus: rgGATAAGATAAGAAtCa
Weblogo: 
PSSM: P0      A      C      G      T
01   6979    809   3761    505      r
02   1871    577   8112   2688      g
03      0      2  11521      0      G
04  11523      0      2      0      A
05    298    126     12  11446      T
06  11521     13      3    296      A
07  11520      3      3      2      A
08      0      0  11523      0      G
09  11521      0      2      0      A
10      1      0      0  11523      T
11  11517      0      8      0      A
12  11523      0      2      2      A
13      0      3  11523     12      G
14  11291    648      2      0      A
15  11451      2     64    116      A
16    859   2405   2686   5573      t
17   1285  10443    307   1293      C
18   8117   2230   1496   1523      a
Type: Heterodimer
Binding TFs: O15535 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
O15535
			
	
			


			

				

				
				
				
				

			

			

		

	
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