DNA Binding Motif

						

			
Accessions: HINFP1_full_3 (HumanTF 1.0)

			
Names: HINFP1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 19
Consensus: GCGGACSttsarCGTCCGC
Weblogo: 
PSSM: P0      A      C      G      T
01    133     34   2939      0      G
02      6   2779      0      3      C
03      0      0   3293      0      G
04      1     17   3783     23      G
05   2541     14      0      0      A
06      0   2634      2      2      C
07      0    934   2369      3      S
08    103    758    670   1851      t
09    130    503    816   2031      t
10     30   1528   1438     95      s
11   1483    498    464    230      a
12   1459    277    931     41      r
13      6   2182    533      0      C
14      0      0   2938      0      G
15      0      8     24   3192      T
16      4   2415      0      0      C
17      0   2373      0      2      C
18      1      2   2926      0      G
19     10   2558     34      3      C
Binding TFs: HINFP1_full (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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