DNA Binding Motif

						

			
Accessions: EEAD0563 (EEADannot 2026-03-04)

			
Names: HvNAC013_1
Organisms: Hordeum vulgare
Libraries: EEADannot 2026-03-04 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 11
Consensus: -rmAAGCAAvm
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0      0      -
02   2121   1208   2059   1379      r
03   1747   2484   1549    987      m
04   6767      0      0      0      A
05   6767      0      0      0      A
06      0      0   6767      0      G
07      0   6767      0      0      C
08   6767      0      0      0      A
09   6767      0      0      0      A
10   1852   1896   1743   1276      v
11   1807   2212   1606   1142      m
Binding TFs: HvNAC013 (No apical meristem (NAM) protein)
			
Publications: Korinkova N, Techer A, Cudejkova MM, Nguyen DT, Kopecny D, Contreras-Moreira B, Navratilova P, Gantet P, Bergougnoux V. Temporal regulation of gene expression during auxin-triggered crown root formation in barley: an integrated approach. Plant Cell Physiol 66:1284-1303 (2025). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.