DNA Binding Motif
| Accessions: | MA0035.5 (JASPAR 2024) |
| Names: | GATA1 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 7 |
| Consensus: | CTWATCT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 3953 62419 2712 2744 C 02 1314 595 652 69267 T 03 49692 710 856 20570 W 04 67550 1292 988 1998 A 05 2206 1238 618 67766 T 06 2567 65937 1471 1853 C 07 7397 3025 765 60641 T |
| Type: | Heterodimer |
| Binding TFs: | P15976 (GATA zinc finger) P15976 |
| Binding Sites: | MA0035.5.1 MA0035.5.10 MA0035.5.11 / MA0035.5.18 / MA0035.5.3 / MA0035.5.7 MA0035.5.12 / MA0035.5.16 MA0035.5.13 MA0035.5.14 MA0035.5.15 MA0035.5.17 / MA0035.5.19 / MA0035.5.20 / MA0035.5.5 / MA0035.5.6 / MA0035.5.9 MA0035.5.2 MA0035.5.4 MA0035.5.8 |
| Publications: | Chen Y, Bates D.L, Dey R, Chen P.H, Machado A.C, Laird-Offringa I.A, Rohs R, Chen L. DNA binding by GATA transcription factor suggests mechanisms of DNA looping and long-range gene regulation. Cell reports 2:1197-206 (2012). [Pubmed] |
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