DNA Binding Motif

						

			
Accessions: EEAD0139 (EEADannot 2025-01-07)

			
Names: LFY-UFO-mLUBS
Organisms: Arabidopsis thaliana
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 19
Consensus: grrwaCAyyswwwtrycyr
Weblogo: 
PSSM: P0      A      C      G      T
01    145    111    201    141      g
02    189     13    396      0      r
03    257     45    245     51      r
04    194     59    106    239      w
05    326     29    148     95      a
06      0    597      0      1      C
07    537     27     11     23      A
08     57    188     98    255      y
09     79    206     95    218      y
10    118    198    161    121      s
11    193    100     84    221      w
12    318     38     12    230      w
13    178     32     62    326      w
14    135     13     70    380      t
15    405      8    152     33      r
16    147    157     21    273      y
17    143    389      0     66      c
18      0    398      0    200      y
19    327     23    172     76      r
Binding TFs: LEAFY (Floricaula / Leafy protein)
			
Publications: Rieu P, Turchi L, Thevenon E, Zarkadas E, Nanao M, Chahtane H, Tichtinsky G, Lucas J, Blanc-Mathieu R, Zubieta C, Schoehn G, Parcy F. The F-box protein UFO controls flower development by redirecting the master transcription factor LEAFY to new cis-elements. Nat Plants 9:315-329 (2023). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.