DNA Binding Motif

						

			
Accessions: SPIB_methyl_3 (HT-SELEX2 May2017)

			
Names: SPIB
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: raWwGrGGAAGTr
Weblogo: 
PSSM: P0      A      C      G      T
01  13056   2473  14833   4501      r
02  27888    808   5772   9027      a
03  20834     57    267   7054      W
04  14361   1085   2403  13528      w
05   7495   3527  27888   1426      G
06  13532   2700  14356    714      r
07    854      3  27888      5      G
08      0      0  27888      9      G
09  27888      0      0      3      A
10  27888      0      0    132      A
11    940   2872  27888     50      G
12    983   2835    926  27888      T
13   7565   2834  11206   6284      r
Binding TFs: SPIB (Ets-domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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