DNA Binding Motif

						

			
Accessions: MA1707.2 (JASPAR 2024)

			
Names: DMRTA1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 10
Consensus: ttGwTACAwt
Weblogo: 
PSSM: P0      A      C      G      T
01   1096    644    409   2671      t
02    383    563    512   2671      t
03      0      5   2671      0      G
04   1076    761      1   1595      w
05    771     89      0   2671      T
06   2671      4     15      0      A
07      2   2671      0      0      C
08   2671      0     39    342      A
09   1392    299    587   2671      w
10    588    650    585   2671      t
Type: Heterodimer
Binding TFs: Q5VZB9 (DM DNA binding domain, DMRTA motif)
Q5VZB9
			
Publications: Murphy M. W., Zarkower D., Bardwell V. J. Vertebrate DM domain proteins bind similar DNA sequences and can heterodimerize on DNA.. BMC Mol. Biol. 8:58 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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