DNA Binding Motif
| Accessions: | MA1208.2 (JASPAR 2024) |
| Names: | GT-2 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | DAP-seq |
| Length: | 11 |
| Consensus: | wtWTTTACygy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 171 56 62 309 w 02 111 56 29 402 t 03 181 0 0 417 W 04 35 13 21 529 T 05 0 0 0 598 T 06 128 35 0 435 T 07 598 0 0 0 A 08 0 593 0 5 C 09 40 378 4 176 y 10 136 36 295 131 g 11 33 186 25 354 y |
| Type: | Heterodimer |
| Binding TFs: | Q39117 (Myb/SANT-like DNA-binding domain, Myb/SANT-like DNA-binding domain) Q39117 |
| Binding Sites: | MA1208.2.1 MA1208.2.10 MA1208.2.11 / MA1208.2.3 MA1208.2.12 MA1208.2.13 / MA1208.2.19 / MA1208.2.7 MA1208.2.14 MA1208.2.15 MA1208.2.16 MA1208.2.17 MA1208.2.18 MA1208.2.2 MA1208.2.20 MA1208.2.4 MA1208.2.5 MA1208.2.6 MA1208.2.8 MA1208.2.9 |
| Publications: | Marechal E., Hiratsuka K., Delgado J., Nairn A., Qin J., Chait B. T., Chua N. H. Modulation of GT-1 DNA-binding activity by calcium-dependent phosphorylation. Plant Mol. Biol. 40:373-386 (1999). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.