DNA Binding Motif

						

			
Accessions: 5vxn_D (3D-footprint 20231221)

			
Names: Transcriptional regulatory protein RcsB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of two RcsB dimers bound to two parallel DNAs.
Length: 5
Consensus: tAaGA
Weblogo: 
PSSM: P0      A      C      G      T
01     16     13     13     54      t
02     96      0      0      0      A
03     54     13     16     13      a
04      0      0     96      0      G
05     96      0      0      0      A
Binding TFs: 5vxn_D (Response regulator receiver domain, Bacterial regulatory proteins, luxR family)
Binding Sites: 5vxn_G
5vxn_H
			
Publications: Filippova EV, Zemaitaitis B, Aung T, Wolfe AJ, Anderson WF. Structural Basis for DNA Recognition by the Two-Component Response Regulator RcsB. MBio : (2018). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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