DNA Binding Motif

						

			
Accessions: 1vtn_C (3D-footprint 20231221)

			
Names: HNF-3/FORK HEAD DNA-RECOGNITION MOTIF
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CO-CRYSTAL STRUCTURE OF THE HNF-3/FORK HEAD DNA-RECOGNITION MOTIF RESEMBLES HISTONE H5
Length: 9
Consensus: CTannTCAA
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02      0      0      0     96      T
03     48      9     20     19      a
04     24     24     24     24      n
05     24     24     24     24      n
06      0      0      0     96      T
07     11     76      0      9      C
08     96      0      0      0      A
09     67     11      9      9      A
Binding TFs: 1vtn_C (Fork head domain)
Binding Sites: 1vtn_A
1vtn_B
			
Publications: Clark K. L., Halay E. D., Lai E., Burley S. K. Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5. Nature 364:412-420 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.