DNA Binding Motif

						

			
Accessions: HOXA2_methyl_2 (HT-SELEX2 May2017)

			
Names: HOXA2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: rTCrTTAr
Weblogo: 
PSSM: P0      A      C      G      T
01   2936   1857   3820    179      r
02    601    262    366   6756      T
03    349   6756    163    285      C
04  11684    110   6756      0      r
05    149    419     71   6756      T
06    619    345     70   6756      T
07   6756      0     34    142      A
08   2720    705   1997   1333      r
Binding TFs: HOXA2 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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