DNA Binding Motif

						

			
Accessions: ZNF444_2 (HT-SELEX2 May2017), UN0191.1 (JASPAR 2024)

			
Names: ZNF444
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 16
Consensus: ccGTCCCCCTCCCCCm
Weblogo: 
PSSM: P0      A      C      G      T
01   1572   3131   2104   1721      c
02    860   6682   1062   1297      c
03   1930    576   6411    237      G
04   1528   1176    113   7052      T
05     18   8507     20     23      C
06     23   8520      8     10      C
07     15   8523      0     26      C
08      2   8521     14     30      C
09     59   8501      4     13      C
10     36     67     12   8495      T
11      6   8525      0     30      C
12     18   8524      3     15      C
13      8   8522      8     17      C
14     25   8260     14    407      C
15     15   8530      3     26      C
16   2219   3764    618   1927      m
Type: Heterodimer
Binding TFs: Q8N0Y2 / ZNF444 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger)
Q8N0Y2
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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