DNA Binding Motif

						

			
Accessions: MA0160.3 (JASPAR 2024)

			
Names: NR4A2
Organisms: Homo sapiens, Rattus norvegicus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: CAP-SELEX
Length: 8
Consensus: AAAGGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    209      0     28     22      A
02    209      0      1     18      A
03    209      5      1      0      A
04      0      0    160     49      G
05      0      0    209      2      G
06      6     22     21    209      T
07      0    209      1     14      C
08    209      4     40      0      A
Type: Heterodimer
Binding TFs: P43354 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P43354
			
Publications: Portales-Casamar E, Kirov S, Lim J, Lithwick S, Swanson M.I, Ticoll A, Snoddy J, Wasserman W.W. PAZAR: a framework for collection and dissemination of cis-regulatory sequence annotation. Genome biology 8:R207 (2007). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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