DNA Binding Motif
| Accessions: | TGA2 (ArabidopsisPBM 20140210) |
| Names: | TGA2 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | ArabidopsisPBM 20140210 1 1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] |
| Length: | 10 |
| Consensus: | rTGACGTCAy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.5015 0.1481 0.3263 0.0240 r 02 0.0156 0.0207 0.0057 0.9579 T 03 0.0055 0.0060 0.8662 0.1222 G 04 0.9667 0.0013 0.0114 0.0206 A 05 0.0009 0.8511 0.0045 0.1435 C 06 0.1435 0.0045 0.8511 0.0009 G 07 0.0206 0.0114 0.0013 0.9667 T 08 0.1222 0.8662 0.0060 0.0055 C 09 0.9579 0.0057 0.0207 0.0156 A 10 0.0270 0.4125 0.1660 0.3945 y |
| Binding TFs: | TGA2 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control) |
| Publications: | Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.