DNA Binding Motif

						

			
Accessions: ATOH1_MOUSE.H10MO.C|M01017 (HOCOMOCO 10)

			
Names: Atoh1
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Tal-related factors{1.2.3}; Neurogenin / Atonal-like factors{1.2.3.4}
Length: 11
Consensus: rrCAGmTGGya
Weblogo: 
PSSM: P0      A      C      G      T
01    272     14    195     19      r
02    149     67    283      1      r
03      5    495      0      0      C
04    500      0      0      0      A
05      2      0    493      5      G
06    262    222     16      0      m
07      8      2      0    490      T
08      1      0    498      1      G
09      8     35    378     79      G
10     57    221     86    136      y
11    198    106    124     72      a
Binding TFs: ATOH1_MOUSE (Helix-loop-helix DNA-binding domain)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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