DNA Binding Motif

						

			
Accessions: MA2027.1 (JASPAR 2024)

			
Names: MYB44
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 12
Consensus: wtAACGGTcAww
Weblogo: 
PSSM: P0      A      C      G      T
01    202    130    117    224      w
02    166    168     25    314      t
03    665      1      2      5      A
04    638     33      1      1      A
05      3    663      1      6      C
06      4     52    559     58      G
07      9      3    655      6      G
08      3     20      2    648      T
09    117    370     19    167      c
10    612     18     21     22      A
11    260    143     84    186      w
12    225    120    121    207      w
Type: Heterodimer
Binding TFs: Q9FDW1 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9FDW1
Binding Sites: MA2027.1.5
MA2027.1.3 / MA2027.1.6
MA2027.1.1
MA2027.1.2
MA2027.1.7
MA2027.1.8
MA2027.1.10
MA2027.1.11
MA2027.1.12 / MA2027.1.13
MA2027.1.14
MA2027.1.15
MA2027.1.16
MA2027.1.17
MA2027.1.18
MA2027.1.19
MA2027.1.20
MA2027.1.4
MA2027.1.9
			
Publications: Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana 8:2015-2030 (Cell). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.