DNA Binding Motif

						

			
Accessions: PAX3_6 (HT-SELEX2 May2017)

			
Names: PAX3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: mtAATyGATTak
Weblogo: 
PSSM: P0      A      C      G      T
01    643    714    413    448      m
02    445    190    565   2218      t
03   2218     17     50      4      A
04   2218     16      7      0      A
05      4     17      0   2218      T
06      0   1075     18   1143      y
07     48     47   2218      0      G
08   2218     25     93     14      A
09      5     12     19   2218      T
10     46     79     50   2218      T
11   2218    651    322    690      a
12    389    445    699    685      k
Binding TFs: PAX3 (Homeobox domain, 'Paired box' domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.