DNA Binding Motif

						

			
Accessions: MA0474.4 (JASPAR 2024)

			
Names: Erg
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 10
Consensus: aCAGGAAGTg
Weblogo: 
PSSM: P0      A      C      G      T
01  19688   2742   4936   2695      a
02   1837  24759   2732    733      C
03  26773   2559    463    266      A
04    170    133  29562    196      G
05    297    265  29221    278      G
06  29248    355    274    184      A
07  27881    370    277   1533      A
08   4894   1173  23600    394      G
09   2318   3310   2870  21563      T
10   4846   3938  18018   3259      g
Type: Heterodimer
Binding TFs: P81270 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
P81270
Binding Sites: MA0474.4.3
MA0474.4.8
MA0474.4.16
MA0474.4.9
MA0474.4.4
MA0474.4.1
MA0474.4.10
MA0474.4.11
MA0474.4.12
MA0474.4.13
MA0474.4.14
MA0474.4.15
MA0474.4.17
MA0474.4.18
MA0474.4.19
MA0474.4.2
MA0474.4.20
MA0474.4.5
MA0474.4.6
MA0474.4.7
			
Publications: Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.