DNA Binding Motif

						

			
Accessions: PhoB (RegulonDB 7.5)

			
Names: PhoB, PhoB transcriptional dual regulator
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 16
Consensus: cTgwcAyAAAwcTgwm
Weblogo: 
PSSM: P0      A      C      G      T
01      2     11      4      2      c
02      0      0      1     18      T
03      0      4     11      4      g
04      6      1      2     10      w
05      4     11      0      4      c
06     15      0      4      0      A
07      2      5      4      8      y
08     17      1      0      1      A
09     14      0      1      4      A
10     16      1      2      0      A
11      8      0      4      7      w
12      2     11      4      2      c
13      1      1      0     17      T
14      4      0     12      3      g
15      5      2      1     11      w
16      5     12      1      1      m
Binding TFs: ECK120005195 (Response regulator receiver domain, Transcriptional regulatory protein, C terminal)
Binding Sites: ECK120011308
ECK120011374
ECK120011448
ECK120011450
ECK120012417
ECK120012850
ECK120012852
ECK120012951
ECK120012953
ECK120012955
ECK120013220
ECK120013478
ECK120013668
ECK120015254
ECK120016530
ECK120016536
ECK120033041
ECK120033043
ECK120033045
			
	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.