DNA Binding Motif

						

			
Accessions: IRF3_4 (HT-SELEX2 May2017)

			
Names: IRF3
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 20
Consensus: agGAAAcsGAAACcGAAACw
Weblogo: 
PSSM: P0      A      C      G      T
01  18171  10241   4483   8963      a
02   4160  10453  29636   3120      g
03   7986    824  39062   1061      G
04  41075    284   3585   1910      A
05  41212     78   1996    990      A
06  41451    449     61   1629      A
07   8335  23534   7825   2164      c
08   4502  13883  22409  11546      s
09   4858     41  40730     91      G
10  41028    138   1875    320      A
11  40291     14    155   2603      A
12  41456     32     19   2785      A
13   2024  32753   8147   2654      C
14   2776  30418   6805   8076      c
15   2091     33  41341     15      G
16  40003   1349   1882    130      A
17  41333    213    169   2357      A
18  41447    470    173   1259      A
19   4703  32671   6775   2957      C
20  11552   8197   6269  15840      w
Binding TFs: IRF3 (Interferon regulatory factor transcription factor)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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