DNA Binding Motif

Accessions: MA1107.3 (JASPAR 2024)
Names: KLF9
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: gCCACACCCAC
Weblogo:
PSSM: P0 A C G T
01 2862 4342 16852 1523 g
02 4664 17839 1660 1416 C
03 287 24709 291 292 C
04 21899 2559 708 413 A
05 221 24863 353 142 C
06 19187 1070 4340 982 A
07 224 24365 735 255 C
08 2428 22117 605 429 C
09 146 24682 205 546 C
10 18837 4339 852 1551 A
11 792 20644 1778 2365 C
Type: Heterodimer
Binding TFs: Q13886 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q13886
Binding Sites: MA1107.3.1
MA1107.3.10
MA1107.3.11 / MA1107.3.16
MA1107.3.12 / MA1107.3.15
MA1107.3.13
MA1107.3.14
MA1107.3.17
MA1107.3.18
MA1107.3.19
MA1107.3.2
MA1107.3.20
MA1107.3.3
MA1107.3.4
MA1107.3.5
MA1107.3.6
MA1107.3.7
MA1107.3.8
MA1107.3.9
Publications: Kaczynski J, Cook T, Urrutia R. Sp1- and Krüppel-like transcription factors. Genome Biol : (2003;4(2):206.). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.