DNA Binding Motif

Accessions: EEAD0567 (EEADannot 2026-03-04)
Names: CACG
Organisms: Hordeum vulgare
Libraries: EEADannot 2026-03-04 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Length: 4
Consensus: CACG
Weblogo:
PSSM: P0 A C G T
01 0 14 0 0 C
02 14 0 0 0 A
03 0 14 0 0 C
04 0 0 14 0 G
Binding TFs: HvSNAC1 (No apical meristem (NAM) protein)
Publications: Kurowska M, Janiak A, Sitko K, Potocka I, Gajecka M, Sybilska E, Plociniczak T, Lip S, Rynkiewicz M, Wiecha K, Nawrot M, Daszkowska-Golec A, Szarejko I. Functional analysis of HvSNAC1 in stomatal dynamics and drought adaptation. J Appl Genet 66:817-840 (2025). [Pubmed]

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