DNA Binding Motif

						

			
Accessions: M0690 (AthalianaCistrome v4_May2016)

			
Names: T24538;, VND3.DAP
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CkTraarwwsAAGCAA
Weblogo: 
PSSM: P0      A      C      G      T
01     10    578      0      0      C
02      0      0    262    326      k
03      0      0      0    588      T
04    246     39    290     13      r
05    237    128     92    131      a
06    280     58    138    112      a
07    206    106    147    129      r
08    204    118     82    184      w
09    237     60     94    197      w
10     62    281    158     87      s
11    587      1      0      0      A
12    482    106      0      0      A
13      0      0    584      4      G
14     50    425     38     75      C
15    503     15      5     65      A
16    571      0      0     17      A
Binding TFs: T24538 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.