DNA Binding Motif

						

			
Accessions: OVOL1_methyl_1 (HT-SELEX2 May2017)

			
Names: OVOL1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: arwACCGTTAttys
Weblogo: 
PSSM: P0      A      C      G      T
01   5438   2348   2657   2591      a
02   7811    265   5223   3369      r
03   6639    797   4545   6395      w
04  13034    519     14   1107      A
05      3  13034      0      0      C
06    251  13034      0     47      C
07      3      0  13034      0      G
08      0      1      2  13034      T
09      0      0      0  13034      T
10  13034      0      0      0      A
11    767   4996   2383  13034      t
12   3055   2976   3228   3775      t
13   1437   5677    496   7357      y
14   2481   3517   4332   2704      s
Binding TFs: OVOL1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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