DNA Binding Motif

						

			
Accessions: ETV7_methyl_1 (HT-SELEX2 May2017)

			
Names: ETV7
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 16
Consensus: smGGAAGyACTTCCks
Weblogo: 
PSSM: P0      A      C      G      T
01    843   1654   1268    925      s
02   2698   1992   1031    982      m
03      9      0   4690     12      G
04      0      4   4690      4      G
05   4690     17      3     58      A
06   4690     59      6     82      A
07    931    166   3759     47      G
08    140   1268    127   3155      y
09   3329    112   1129    120      A
10     44   3761    195    929      C
11     85      3     59   4690      T
12     58      6     24   4690      T
13     12   4690      8     10      C
14      4   4690      4     13      C
15    995   1029   2000   2690      k
16    843   1300   1689    858      s
Binding TFs: ETV7 (Ets-domain, Sterile alpha motif (SAM)/Pointed domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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