DNA Binding Motif

						

			
Accessions: 5emc_AB (3D-footprint 20231221)

			
Names: Glucocorticoid receptor
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Transcription factor GRDBD and smGRE complex
Length: 13
Consensus: GAACAnnntGTnC
Weblogo: 
PSSM: P0      A      C      G      T
01      4      1     87      4      G
02     66     16      4     10      A
03     96      0      0      0      A
04      1     91      0      4      C
05     88      0      4      4      A
06     24     24     24     24      n
07     24     24     24     24      n
08     24     24     24     24      n
09     16     10     12     58      t
10      1      0     91      4      G
11      0      0      0     96      T
12     24     24     24     24      n
13      4     72      4     16      C
Type: Heterodimer
Binding TFs: 5emc_A (Zinc finger, C4 type (two domains))
5emc_B (Zinc finger, C4 type (two domains))
Binding Sites: 5emc_C
5emc_D
			
	
			


			

				

				
				
				
				

			

			

		

	
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