DNA Binding Motif

						

			
Accessions: HOXB13_TBX3_2 (HumanTF2 1.0)

			
Names: HOXB13_TBX3
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 18
Consensus: cymrTAAAmsTcaCACcy
Weblogo: 
PSSM: P0      A      C      G      T
01    106    209     95     16      c
02     39    201     27    157      y
03    156    149     19    101      m
04    292     16    134      0      r
05      0      4      5    425      T
06    425      0     38    118      A
07    425     13      0     43      A
08    425      8     13      7      A
09    151    129     66     80      m
10     87    120    132     87      s
11     53     66     55    425      T
12     89    190     90     56      c
13    425     50    139     45      a
14     12    425     12     29      C
15    425     18    150     17      A
16      0    425     24      0      C
17     85    319     72    107      c
18     97    124     26    179      y
Type: Heterodimer
Binding TFs: HOXB13_TF1 / HOXB13_TF2 (Homeobox domain)
HOXB13_Full (Homeobox domain, Hox protein A13 N terminal)
TBX3_TF2 (T-box)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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