DNA Binding Motif

						

			
Accessions: Foxj3_DBD_2 (HumanTF 1.0)

			
Names: Foxj3
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 14
Consensus: GTAAACArTmAACA
Weblogo: 
PSSM: P0      A      C      G      T
01   1048    505   4066    121      G
02    567    585    243   5649      T
03   3504    505    138    181      A
04   3581    167     94     99      A
05   3556     65    104     56      A
06    175   5079    179    422      C
07   3541     79    112     40      A
08   2933     87   2155     99      r
09   1175    560    187   5423      T
10   3240   1524    396    323      m
11   3550    294    125    105      A
12   3620    382    134    278      A
13    480   5098    195    432      C
14   3659     21    145    156      A
Binding TFs: Foxj3_DBD (Fork head domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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